Bin Dong(董彬) CV

Associate Professor

Beijing International Center for Mathematical Research(BICMR), Peking University

Associate Director

Laboratory for Biomedical Image Analysis

Beijing Institute of Big Data Research, Peking University

 

Office: BICMR77101; Phone: +8610-62744091
Email: dongbin {at} math {dot} pku {dot} edu {dot} cn

 

北京国际数学研究中心

北京市海淀区颐和园路5

北京大学镜春园78号院77101室,100871

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Home -- Biography -- Research -- Publications -- Teaching

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See Google Scholar for citations.

Machine and Deep Learning

 

1.       Yiping Lu, Aoxiao Zhong, Quanzheng Li and Bin Dong, Beyond Finite Layer Neural Networks: Bridging Deep Architectures and Numerical Differential Equations, arXiv:1710.10121, 2017.

2.       Zichao Long, Yiping Lu, Xianzhong Ma and Bin Dong, PDE-Net: Learning PDEs from Data, arXiv:1710.09668, 2017.

3.       Yue Selena Niu, Ning Hao and Bin Dong, A new reduced-rank linear discriminant analysis method and its applications, accepted by Statistica Sinica, Dec. 2016.

4.       Bin Dong and Ning Hao, Semi-supervised high dimensional clustering by tight wavelet frames, Proceedings of SPIE, Wavelets & Sparsity XVI, Aug. 2015.

MATLAB Codes (for second row of Table 1)

5.       Ning Hao, Bin Dong and Jianqing Fan, Sparsifying the Fisher Linear Discriminant by Rotation, Journal of the Royal Statistical Society Series B, 77(4), 827-851, 2015.

MATLAB Codes (Rotation)

 

Wavelet Frame (-Like) Representations on Surfaces/Manifolds/Graphs

 

1.       Bin Dong, Sparse Representation on Graphs by Tight Wavelet Frames and Applications, Applied and Computational Harmonic Analysis, 42(3), 452-479, 2017.

MATLAB Codes: Fast tight wavelet frame transform on graphs (WFTG); Graph Clustering by WFTG.

2.       Bin Dong, Qingtang Jiang, Chaoqiang Liu and Zuowei Shen, Multiscale Representation of Surfaces by Tight Wavelet Frames with Applications to Denoising, Applied and Computational and Harmonic Analysis, 41(2), 561-589, 2016.

3.       Bin Dong, Aichi Chien, Zuowei Shen and Stanley Osher, A new multiscale representation for shapes and its application to blood vessel recovery, SIAM Journal on Scientific Computing, 32(4), 1724-1739, 2010.

4.       Bin Dong, Yu Mao, Ivo D. Dinov, Zhuowen Tu, Yonggang Shi, Yalin Wang and Arthur W. Toga, Wavelet-based representation of biological shapes, Advances in Visual Computing: Part I, 955-964, ISVC 2009 (5th International Symposium on Visual Computing, ISVC 2009, Las Vegas, Nevada, USA).

 

Wavelet Frame Transforms and Differential Operators: Bridging Discrete and Continuum

 

1.       Jae Kyu Choi, Bin Dong and Xiaoqun Zhang, An Edge Driven Wavelet Frame Model for Image Restoration, arXiv:1701.07158, 2017.

MATLAB Codes for deblurring and inpainting

2.       Bin Dong, Qingtang Jiang and Zuowei Shen, Image restoration: wavelet frame shrinkage, nonlinear evolution PDEs, and beyond, Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal, 15(1)606-660, 2017.

MATLAB Codes (for Table 2 and Table 3 with image example "Peppers")

3.       Bin Dong, Zuowei Shen and Peichu Xie, Image restoration: a general wavelet frame based model and its asymptotic analysis, SIAM Journal on Mathematical Analysis, 49(1), 421-445, 2017.

4.       Jian-Feng Cai, Bin Dong and Zuowei Shen, Image restoration: a wavelet frame based model for piecewise smooth functions and beyond, Applied and Computational Harmonic Analysis, 41(1), 94-138, 2016.

MATLAB Codes

5.       Jian-Feng Cai, Bin Dong, Stanley Osher and Zuowei Shen, Image restoration: total variation; wavelet frames; and beyond, Journal of the American Mathematical Society, 25(4), 1033-1089, 2012.

 

Medical Imaging, Image Analysis and Other Medical Applications

 

1.       Dufan Wu, Kyungsang Kim, Bin Dong and Quanzheng Li, End-to-End Abnormality Detection in Medical Imaging, arXiv:1711.02074, 2017.

2.       Haimiao Zhang, Bin Dong and Baodong Liu, A Re-weighted Joint Spatial-Radon Domain CT Image Reconstruction Model for Metal Artifact Reduction, accepted by SIAM Journal on Imaging Science, Nov. 2017.

MATLAB Codes

3.       Geng Chen, Bin Dong, Yong Zhang, Dinggang Shen, Pew-Thian Yap, q-Space Upsampling Using x-q Space Regularization, MICCAI 2017, 620-628.

4.       Geng Chen, Bin Dong, Yong Zhang, Dinggang Shen, Pew-Thian Yap, Neighborhood Matching for Curved Domains with Application to Denoising in Diffusion MRI, MICCAI 2017, 629-637.

5.       Pew-Thian Yap, Bin Dong, Yong Zhang and Dinggang Shen, Tight Graph Framelets for Sparse Diffusion MRI q-Space Representation, MICCAI 2016, 561-569.

6.       Yu Yang, Bin Dong and Zaiwen Wen, Randomized Algorithms For High Quality Treatment Planning in Volumetric Modulated Arc Therapy, Inverse Problems, 32(2),025007,2017.

7.       Jae Kyu Choi, Bin Dong and Xiaoqun Zhang, Limited Tomography Reconstruction via Tight Frame and Simultaneous Sinogram Extrapolation, Journal of Computational Mathematics, 34(6), 575-5892016.

8.       Ruohan Zhan and Bin Dong, CT Image Reconstruction by Spatial-Radon Domain Data-Driven Tight Frame Regularization, SIAM Journal on Imaging Sciences, 9(3), 1063-1083,2016.

Matlab Codes: SRD-DDTF (This package includes codes for our earlier work: Dong, Li and Shen, X-ray CT image reconstruction via wavelet frame based regularization and Radon domain inpainting, JSC, 2013)

9.       Jiulong Liu, Xiaoqun Zhang, Bin Dong, Zuowei Shen and Lixu Gu, A wavelet frame method with shape prior for ultrasound video segmentation, SIAM Journal on Imaging Sciences, 9(2), 495-536. 2016. (This article is spotlighted by SIAM in "SIAM Nuggets", and was also reported in various websites: SIAM.NEWS; Science_News; ScienceDaily; Scifeeds; Science_Codex; EurekAlert; MedImaging; Hitechdays; TechXplore; Technobahn; Pubniche; Healthmanagement.org; Healthcarebusiness; AuntMinnie; Myinforms; OOYUZ; Wrightwood)

10.    Li-Tien Cheng, Bin Dong, Chunhua Men, Xun Jia and Steve B. Jiang, Binary Level-Set Shape Optimization Model and Algorithm for Volumetric Modulated Arc Therapy in Cancer Radiotherapy, SIAM Journal on Scientific Computing, 35(6), 1321-1340, 2013.

11.    Xuejun Gu, Bin Dong, Jing Wang, John Yordy, Loren Mell, Xun Jia, and Steve B. Jiang, A Contour-Guided Deformable Image Registration Algorithm for Adaptive Radiotherapy, Physics in Medicine and Biology, 58(6). 1889, 2013.

12.    Bin Dong, Jia Li and Zuowei Shen, X-ray CT image reconstruction via wavelet frame based regularization and Radon domain inpainting, Journal of Scientific Computing, 54(2-3), 333-349 2013.

13.    Bin Dong, Yan Jiang Graves, Xun Jia and Steve B. Jiang, Optimal Surface Marker Locations for Tumor Motion Estimation in Lung Cancer Radiotherapy, Physics in Medicine and Biology, 57(24), 8201, 2012

14.    Bin Dong and Zuowei Shen, MRA-based wavelet frames and applications: image segmentation and surface reconstruction, Processing of SPIE, Defense, Security and Sensing, Vol 8401, 2012.

15.    Xun Jia, Bin Dong, Yifei Lou and Steve B. Jiang, GPU-based iterative cone beam CT reconstruction using tight frame regularization, Physics in Medicine and Biology, 56, 3787-3807 2011.

16.    Aichi Chien, James Sayre, Bin Dong, Jian Ye and Fernando Vinuela, 3D Quantitative Evaluation of Atherosclerotic Plaque based on Rotational Angiography, American Journal of Neuroradiology, 32, 1249-1254, 2011.

17.    Zhen Tian, Xun Jia, Bin Dong, Yifei Lou and Steve B. Jiang, Low-dose 4DCT reconstruction via temporal nonlocal means, Medical Physics, 38(3), March 2011.

18.    Daren Lee, Ivo Dinov, Bin Dong, Boris Gutman, Igor Yanovsky and Arthur W. Toga, CUDA Optimization strategies for compute- and memory-bound neuroimaging algorithms, Computer Methods and Programs in Biomedicine, Elsevier, 2010.

19.    Bin Dong, Aichi Chien and Zuowei Shen, Frame based segmentation for medical images, Communications in Mathematical Sciences, 9(2), 551-559, 2010.

20.    Xun Jia, Yifei Lou, Bin Dong, Zhen Tian and Steve Jiang, 4D computed tomography reconstruction from few-projection data via temporal non-local regularization, MICCAI 2010, Beijing, China, Sep 20-24, 2010.

21.    Bin Dong, Aichi Chien, Yu Mao, Jian Ye, Fernando Vinuela and Stanley Osher, Level set based brain aneurysm capturing in 3D, Inverse Problems and Imaging (special issue in medical image analysis), 4(2), 241-255, 2010.

22.    Bin Dong, Eric Savitsky and Stanley Osher, A novel method for enhanced needle localization using ultrasound-guidance, Advances in Visual Computing: Part I, 914-923, 2009 (5th International Symposium on Visual Computing, ISVC 2009, Las Vegas, Nevada, USA).

23.    Bin Dong, Aichi Chien, Yu Mao, Jian Ye and Stanley Osher, Level set based surface capturing in 3D medical images, MICCAI 2008, 162-169, 2008.

 

Image Processing and Analysis (Modeling and Algorithmic Design)

 

1.       Chenglong Bao, Bin Dong, Likun Hou, Zuowei Shen and Xiaoqun Zhang, Xue Zhang, Image restoration by minimizing zero norm of wavelet frame coefficients, Inverse Problems, 32(11), 2016.

2.       Bin Dong and Yong Zhang, An efficient algorithm for l0 minimization in wavelet frame based image restoration, Journal of Scientific Computing, 54(2-3), 350-368, 2013.

MATLAB Codes

3.       Yong Zhang, Bin Dong and Zhaosong Lu, l0 minimization of wavelet frame based image restoration, Mathematics of Computation, 82, 995-1015, 2013.

MATLAB Codes

4.       Jian Ye, Igor Yanovsky, Bin Dong, Rima Gandlin, Achi Brandt and Stanley Osher, Multigrid narrow band surface reconstruction via level set functions, 8th International Symposium on Visual Computing (ISVC), July 16-18, 2012, Greece.

5.       Bin Dong, Hui Ji, Jia Li, Zuowei Shen and Yuhong Xu, Wavelet frame based blind image inpainting, Applied and Computational Harmonic Analysis, 32(2), 268-279, 2012.

6.       Bin Dong and Zuowei Shen, Wavelet frame based surface reconstruction from unorganized points, Journal of Computational Physics, 230(22), 8247-8255, 2011.

7.       Yu Mao, Bin Dong and Stanley Osher, A nonlinear PDE-based method for sparse deconvolution, Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal, 8(3), 965-976, 2010.

8.       Stanley Osher, Yu Mao, Bin Dong and Wotao Yin, Fast linearized Bregman iterations for compressive sensing and sparse denoising, Communications in Mathematical Sciences, 8(1), 93-111, 2010.

9.       Bin Dong, Jian Ye, Stanley Osher and Ivo Dinov, Level set based nonlocal surface restoration, Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal, Vol. 7(2), 589-598, 2008.

 

Pseudo-Splines and Wavelet Frames (Theoretical Studies)

 

1.       Bin Dong, Nira Dyn and Kai Hormann, Properties of dual pseudo-splines, Applied and Computational Harmonic Analysis, 29(1), 104-110, 2010.

2.       Bin Dong and Zuowei Shen, Pseudo-splines, wavelets and framelets, Applied and Computational Harmonic Analysis, 22, 78-104, 2007.

3.       Bin Dong and Zuowei Shen, Linear independence of pseudo-splines, Proceedings of American Mathematical Society, 134, 2685-2694, 2006.

4.       Bin Dong and Zuowei Shen, Construction of biorthogonal wavelets from pseudo-splines, Journal of Approximation Theory, Vol. 138 (2), 211-231, 2006.

 

Book (Chapters) /Review Papers

 

1.       欧高炎、朱占星、董彬、鄂维南,数据科学导引,高等教育出版社,201712

2.       董彬、沈佐伟、张小群,图象恢复问题中的数学方法,中科院数学所讲座系列(席南华 主编),科学出版社,2017.

3.       Bin Dong and Zuowei Shen, Image restoration: a data-driven perspective, Proceedings of the International Congress of Industrial and Applied Mathematics (ICIAM), Beijing, China, High Education Press (Lei Guo and Zhi-Ming Ma eds), 65-108, 2015.

4.       Bin Dong and Zuowei Shen, MRA-based wavelet frames and applications, IAS Lecture Notes Series, Hong-Kai, ed. "Mathematics in Image Processing". Vol. 19. American Mathematical Society, 2013.

Others

 

1.        Robert Crandall, Bin Dong and Ali Bilgin, Randomized Iterative Hard Thresholding: A Fast Approximate MMSE Estimator for Sparse Approximations, Technical Report, June 2013 (revised, April 2014).

2.        Bin Dong, The implicit representation of biological shapes and forms, Biomedical Computation Review (issue: Spring 2009), Published by Simbios, the NIH National Center for Physics-Based Simulation of Biological Structures, 2009.

3.        Bin Dong, Applications of Variational Models and Partial Differential Equations in Medical Image and Surface Processing, PhD Thesis, UCLA, 2009.

4.        Bin Dong, Pseudo-splines, Wavelets and Framelets, M.S. Thesis, National University of Singapore, 2005.